ffeatools.modules.FFEA_lj.FFEA_lj Class Reference

Public Member Functions
def	__init__ (self, fname="")
def	load (self, fname)
def	load_lj (self, fname)
def	default (self)
def	set_interaction_pair (self, i, j, eps, r0)
def	write_to_file (self, fname)
def	reset (self)

Data Fields
	valid
	empty
	num_face_types
	interaction

Constructor & Destructor Documentation

__init__()

def ffeatools.modules.FFEA_lj.FFEA_lj.__init__	(		self,
			fname = ""
	)

Member Function Documentation

default()

def ffeatools.modules.FFEA_lj.FFEA_lj.default

(

self

)

Referenced by ffeatools.modules.FFEA_lj.FFEA_lj.reset().

load()

def ffeatools.modules.FFEA_lj.FFEA_lj.load	(		self,
			fname
	)

Referenced by ffeatools.modules.FFEA_springs.FFEA_springs.__init__().

load_lj()

def ffeatools.modules.FFEA_lj.FFEA_lj.load_lj	(		self,
			fname
	)

Referenced by ffeatools.modules.FFEA_lj.FFEA_lj.load().

reset()

def ffeatools.modules.FFEA_lj.FFEA_lj.reset

(

self

)

Referenced by ffeatools.modules.FFEA_lj.FFEA_lj.__init__(), ffeatools.modules.FFEA_skeleton.FFEA_skeleton.__init__(), ffeatools.modules.FFEA_vdw.FFEA_vdw.__init__(), ffeatools.modules.FFEA_springs.FFEA_springs.__init__(), ffeatools.modules.FFEA_pdb_OLD.FFEA_pdb.__init__(), ffeatools.modules.FFEA_pin.FFEA_pin.__init__(), ffeatools.modules.FFEA_node.FFEA_node.__init__(), ffeatools.modules.FFEA_stokes.FFEA_stokes.__init__(), ffeatools.modules.FFEA_trajectory.FFEA_trajectory.__init__(), ffeatools.modules.FFEA_pdb.FFEA_pdb.__init__(), ffeatools.modules.FFEA_topology.FFEA_topology.__init__(), ffeatools.modules.FFEA_material.FFEA_material.__init__(), ffeatools.modules.FFEA_measurement.FFEA_measurement.__init__(), ffeatools.modules.FFEA_script.FFEA_script.__init__(), ffeatools.modules.FFEA_surface.FFEA_surface.__init__(), ffeatools.modules.FFEA_springs.FFEA_spring.__init__(), ffeatools.modules.FFEA_lj.FFEA_lj_pair.__init__(), ffeatools.modules.FFEA_pdb_OLD.FFEA_pdb_blob.__init__(), ffeatools.modules.FFEA_trajectory.FFEA_traj_blob.__init__(), ffeatools.modules.FFEA_pdb_OLD.FFEA_pdb_frame.__init__(), ffeatools.modules.FFEA_pdb.FFEA_pdb_atom.__init__(), ffeatools.modules.FFEA_surface.FFEA_face.__init__(), ffeatools.modules.FFEA_topology.FFEA_element.__init__(), ffeatools.modules.FFEA_material.FFEA_material.build(), ffeatools.modules.FFEA_trajectory.FFEA_trajectory.build_from_pdb(), ffeatools.modules.FFEA_pdb.FFEA_pdb.build_from_rod(), ffeatools.modules.FFEA_pdb_OLD.FFEA_pdb.build_from_traj(), ffeatools.modules.FFEA_pdb.FFEA_pdb.build_from_traj(), ffeatools.modules.FFEA_trajectory.FFEA_trajectory.load(), ffeatools.modules.FFEA_measurement.FFEA_measurement.load_detailed(), ffeatools.modules.FFEA_surface.FFEA_surface.load_face(), ffeatools.modules.FFEA_measurement.FFEA_measurement.load_global(), ffeatools.modules.FFEA_node.FFEA_node.load_vol(), ffeatools.modules.FFEA_surface.FFEA_surface.load_vol(), and ffeatools.modules.FFEA_pin.FFEA_pin.pin_radially().

set_interaction_pair()

def ffeatools.modules.FFEA_lj.FFEA_lj.set_interaction_pair	(		self,
			i,
			j,
			eps,
			r0
	)

write_to_file()

def ffeatools.modules.FFEA_lj.FFEA_lj.write_to_file	(		self,
			fname
	)

Field Documentation

empty

ffeatools.modules.FFEA_lj.FFEA_lj.empty

Referenced by ffeatools.modules.FFEA_pdb.FFEA_pdb.build_from_rod(), ffeatools.modules.FFEA_pdb.FFEA_pdb.build_from_traj(), ffeatools.modules.FFEA_skeleton.FFEA_skeleton.reset(), ffeatools.modules.FFEA_lj.FFEA_lj.reset(), ffeatools.modules.FFEA_vdw.FFEA_vdw.reset(), ffeatools.modules.FFEA_stokes.FFEA_stokes.reset(), ffeatools.modules.FFEA_trajectory.FFEA_trajectory.reset(), ffeatools.modules.FFEA_measurement.FFEA_measurement.reset(), ffeatools.modules.FFEA_pdb.FFEA_pdb.reset(), ffeatools.modules.FFEA_script.FFEA_script.reset(), and ffeatools.modules.FFEA_node.FFEA_node.reset().

interaction

ffeatools.modules.FFEA_lj.FFEA_lj.interaction

Referenced by ffeatools.modules.FFEA_lj.FFEA_lj.reset(), ffeatools.modules.FFEA_lj.FFEA_lj.set_interaction_pair(), and ffeatools.modules.FFEA_lj.FFEA_lj.write_to_file().

num_face_types

ffeatools.modules.FFEA_lj.FFEA_lj.num_face_types

Referenced by ffeatools.modules.FFEA_lj.FFEA_lj.reset(), and ffeatools.modules.FFEA_lj.FFEA_lj.write_to_file().

valid

ffeatools.modules.FFEA_lj.FFEA_lj.valid

Referenced by ffeatools.modules.FFEA_pdb.FFEA_pdb.build_from_rod(), ffeatools.modules.FFEA_pdb.FFEA_pdb.build_from_traj(), ffeatools.modules.FFEA_trajectory.FFEA_trajectory.load(), ffeatools.modules.FFEA_skeleton.FFEA_skeleton.load(), ffeatools.modules.FFEA_lj.FFEA_lj.load(), ffeatools.modules.FFEA_vdw.FFEA_vdw.load(), ffeatools.modules.FFEA_topology.FFEA_topology.load(), ffeatools.modules.FFEA_pin.FFEA_pin.load(), ffeatools.modules.FFEA_pdb.FFEA_pdb.load(), ffeatools.modules.FFEA_stokes.FFEA_stokes.load(), ffeatools.modules.FFEA_node.FFEA_node.load(), ffeatools.modules.FFEA_material.FFEA_material.load(), ffeatools.modules.FFEA_surface.FFEA_surface.load(), ffeatools.modules.FFEA_skeleton.FFEA_skeleton.reset(), ffeatools.modules.FFEA_lj.FFEA_lj.reset(), ffeatools.modules.FFEA_vdw.FFEA_vdw.reset(), ffeatools.modules.FFEA_stokes.FFEA_stokes.reset(), ffeatools.modules.FFEA_trajectory.FFEA_trajectory.reset(), ffeatools.modules.FFEA_measurement.FFEA_measurement.reset(), ffeatools.modules.FFEA_pdb.FFEA_pdb.reset(), ffeatools.modules.FFEA_script.FFEA_script.reset(), and ffeatools.modules.FFEA_node.FFEA_node.reset().

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The documentation for this class was generated from the following file:

• FFEA_lj.py